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How to account for the uncertainty from standard toxicity tests in species sensitivity distributions: an example in non-target plants

Authors: Sandrine Charles; Dan Wu; Virginie Ducrot;

How to account for the uncertainty from standard toxicity tests in species sensitivity distributions: an example in non-target plants

Abstract

This research proposes new perspectives accounting for the uncertainty on 50% effective rates (ER 50) as interval input for species sensitivity distribution (SSD) analyses and evaluating how to include this uncertainty may influence the 5% Hazard Rate (HR 5) estimation. We explored various endpoints (survival, emergence, shoot-dry-weight) for non-target plants from seven standard greenhouse studies that used different experimental approaches (vegetative vigour vs. seedling emergence) and applied seven herbicides at different growth stages. Firstly, for each endpoint of each study, a three-parameter log-logistic model was fitted to experimental toxicity test data for each species under a Bayesian framework to get a posterior probability distribution for ER 50. Then, in order to account for the uncertainty on the ER 50 , we explored two censoring criteria to automatically censor ER 50 taking the ER 50 probability distribution and the range of tested rates into account. Secondly, based on doseresponse fitting results and censoring criteria, we considered input ER 50 values for SSD analyses in three ways (only point estimates chosen as ER 50 medians, interval-censored ER 50 based on their 95% credible interval and censored ER 50 according to one of the two criteria), by fitting a log-normal distribution under a frequentist framework to get the three corresponding HR 5 estimates. We observed that SSD fitted reasonably well when there were at least six distinct intervals for the ER 50 values. By comparing the three SSD curves and the three HR 5 estimates, we shed new light on the fact that both propagating the uncertainty from the ER 50 estimates and including censored data into SSD analyses often leads to smaller point estimates of HR 5 , which is more conservative in a risk assessment context. In addition, we recommend not to focus solely on the point estimate of the HR 5 , but also to look at the precision of this estimate as depicted by its 95% confidence interval.

International audience

Country
France
Subjects by Vocabulary

Microsoft Academic Graph classification: Statistics Range (statistics) Credible interval Mathematics Hazard ratio Censoring (statistics) Probability distribution Posterior probability Context (language use) Frequentist inference Point estimation Confidence interval Test data

Keywords

Ecotoxicology, Toxicology, Pathology and Laboratory Medicine, Mathematical and Statistical Techniques, [MATH.MATH-ST]Mathematics [math]/Statistics [math.ST], Medicine and Health Sciences, Evolutionary Emergence, [STAT.AP]Statistics [stat]/Applications [stat.AP], Multidisciplinary, Ecology, Pharmaceutics, Q, Dosage Regimen Design Methods, R, Eukaryota, Agriculture, Plants, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Curve Fitting, Physical Sciences, Medicine, [SDV.TOX.ECO]Life Sciences [q-bio]/Toxicology/Ecotoxicology, Agrochemicals, [STAT.ME]Statistics [stat]/Methodology [stat.ME], Research Article, Drug Research and Development, Evolutionary Processes, Science, Log Dose-Response Method, Plant Development, Research and Analysis Methods, Models, Biological, [SDV.EE.ECO]Life Sciences [q-bio]/Ecology, environment/Ecosystems, [MATH.MATH-GM]Mathematics [math]/General Mathematics [math.GM], Species Specificity, Toxicity Tests, [SDE.ES]Environmental Sciences/Environment and Society, Pharmacology, Evolutionary Biology, Herbicides, Ecology and Environmental Sciences, Organisms, Biology and Life Sciences, Probability Theory, Probability Distribution, [INFO.INFO-MO]Computer Science [cs]/Modeling and Simulation, [SDE.ES]Environmental Sciences/Environmental and Society, Toxicity Testing, Seedlings, [SDE.BE]Environmental Sciences/Biodiversity and Ecology, Mathematical Functions, Mathematics, [SDV.EE.IEO]Life Sciences [q-bio]/Ecology, environment/Symbiosis

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    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
8
Top 10%
Average
Top 10%
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gold
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