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  • Rural Digital Europe
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Biblioteca Tomás Navarro Tomás (CCHS-CSIC);

    [ES] Dataset procedente del catálogo de la Red de Bibliotecas y Archivos del CSIC que recoge los documentos digitalizados del fondo “Manuscritos” conservados en el Archivo de la biblioteca Tomás Navarro Tomás del Centro de Ciencias Humanas y Sociales (CCHS) del CSIC. Se trata de una colección de documentos misceláneos reunidos durante la etapa del Centro de Estudios Históricos (CEH). La colección al completo está formada por 195 documentos agrupados en legajos y códices encuadernados procedentes de archivos privados. Predomina la documentación de carácter notarial, testamentos y títulos de propiedad, de administración y gestión de propiedades, los libros de cuentas pero también hay obras de carácter histórico y literario. Este dataset contiene los 135 documentos digitalizados hasta el momento. [EN] Dataset obtained from the CSIC's Library & Archive Network, which includes the digitalized documents from the collection “Manuscritos” (“Manuscripts”) preserved at the Tomás Navarro Tomás library belonging to the Centro de Ciencias Humanas y Sociales (CCHS) of the CSIC. The now disappeared Centro de Estudios Históricos (CEH) compiled a collection of miscellaneous documents. The complete collection contains 195 documents from private archives that were bound and gathered in codices and dossiers. It comprises mainly notary documents, testaments, property titles, papers related to administration and property management and accounting books, but it also includes work of a historical and literary character. This V1 of the dataset contains the 135 documents that have been digitalized to date. Este conjunto de datos está sujeto a una licencia CC BY-SA 4.0 No

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    DIGITAL.CSIC
    Dataset . 2023
    License: CC BY NC SA
    Data sources: Datacite
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      DIGITAL.CSIC
      Dataset . 2023
      License: CC BY NC SA
      Data sources: Datacite
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    Authors: Tarifa, Rubén; Calvo, Gemma; González Robles, A.; Pérez, Antonio J.; +2 Authors

    [Methodology] We selected 40 paired olive groves from 20 localities, covering a cultivated area circa 35 km2 and encompassing a distance of 310 km between the most distant ones, hence widely distributed across the Guadalquivir Valley (Andalucía, Spain). Localities were selected to cover a wide gradient in landscape complexity, from landscapes dominated by olive groves to landscapes including a large fraction of natural (forests, scrublands, streams and pastures with native plants) or semi-natural habitats (gullies, vegetated edges and field margins) or other woody and annual crops. At each locality, the pair of olive groves differed in the herb cover management (20 low-intensity and 20 intensive groves) in 2016 while some of them changed their management in 2019, while sharing the same landscape context. Farm size and climatic and edaphic condition varied between localities but were relatively similar between the pair of farms within locality. Low-intensity management involved the maintenance of the ground herb cover most of the year through agroecological practices, such as grazing (mainly with sheep), mowing or stand maintaining between olive trees. Some of these low-intensity managed olive farms where also organic when, in addition, there was no use of pesticides nor synthesis fertilizers. In contrast, intensive management persistently reduced herb cover by herbicides and/or recurrent tillage. The landscape of each locality was classified in simple (characterized by vast extensions of olive groves with very few natural habitat patches), intermediate (olive groves are intermingled with annual crops and with greater extension of natural habitats) or complex (olive groves are scarcer and the area covered by forests, shrublands, streams and grasslands with native plants is larger). The community of herb species was monthly sampled in each olive groves from April to June in 2016 and 2019, using 1-m2 quadrats. We surveyed 4-6 herbs quadrats per grove (in olive field habitats), depending on the orchard size (4 sampling points in small groves [10 ha]) and 2-4 herbs quadrats per olive grove in semi-natural habitats adjacent to olive field. Substantial work was done in the lab for the classification of the many species that we were not able to determine at species level in the field. BBDD_Herbs_sps_habitat_farm.csv ' This data set was compilated with funds by MICINN through European Regional Development Fund [SUMHAL, LIFEWATCH-2019-09-CSIC-4, POPE 2014-2020] [Work Package 9. Task 9.3.2. Model impact of land use change]. Data comes mainly from LIFE project OLIVARES VIVOS (LIFE14 NAT/ ES/1001094) of the European Commission and complemented partially with additional surveys under LIFEWATCH SUMHAL. CSIC is acknowledged for supporting Open Access publication. Our aim was to characterize the species composition of ground herb covers present in the olive groves and their semi-natural adjacent habitats of the southern Iberian Peninsula (Andalucia, Spain), according to herb cover management and landscape complexity of each grove. We selected 40 paired olive farms from 20 localities across Andalucía. [Files] BBDD_Farm_info.csv [shows the location and characteristics of sampled olive farms].-- BBDD_Herbs_sps_habitat_farm.csv [shows herb community detected per habitat within Olive_farm].-- Metada.csv [records information about the meaning of columns in ' Farm_info.csv, 'Plant_database_Habitats_ziziphus.csv', ' Please, see Metadata.csv file. Peer reviewed

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    DIGITAL.CSIC
    Dataset . 2023
    License: CC BY NC SA
    Data sources: Datacite
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      DIGITAL.CSIC
      Dataset . 2023
      License: CC BY NC SA
      Data sources: Datacite
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    Authors: Almagro, María; Díaz-Pereira, Elvira; Martínez-Mena García, M. Dolores; Boix-Fayos, Carolina;

    European Commission: Diverfarming - Crop diversification and low-input farming across Europe: from practitioners engagement and ecosystems services to increased revenues and chain organisation (728003) Database on main crop and secondary crop yields of the CS1 Study case for the period 2019-2021 Peer reviewed

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    ZENODO
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2022
    License: CC BY
    Data sources: ZENODO
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Recolector de Cienci...arrow_drop_down
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      ZENODO
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2022
      License: CC BY
      Data sources: ZENODO
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    Authors: EFSA BIOHAZ Panel; Koutsoumanis, Konstantinos; Allende, Ana; Álvarez-Ordóñez, Avelino; +25 Authors

    The European Food Safety Authority (EFSA) asked the Panel on Biological Hazards (BIOHAZ) to deliver a scientific Opinion on the maintenance of the list of qualified presumption of safety (QPS) biological agents. The QPS approach was developed by the EFSA Scientific Committee to provide a harmonised generic pre-evaluation to support safety risk assessments of biological agents intentionally introduced into the food and feed chain, in support of the concerned scientific Panels and Units in the frame of market authorisations. The taxonomic identity, body of knowledge, the safety concerns in relation to pathogenicity and virulence, and the safety for the environment of those microbiological agents are assessed. Safety concerns identified for a respective taxonomic unit (TU) are, where possible and reasonable in number, reflected as ‘qualifications’ that are assessed at the strain level by the EFSA’s scientific Panels. Useful links on EFSA QPS EFSA topic on QPS: https://www.efsa.europa.eu/en/topics/topic/qualified-presumption-safety-qps Link to the virtual issue on QPS on Wiley Online Library: https://efsa.onlinelibrary.wiley.com/doi/toc/10.1002/(ISSN)1831-4732.QPS Versions history: Versions 1 and 2 were substituted by version 3 – all are associated with the QPS Panel statement EFSA 7: suitability of taxonomic units notified to EFSA until September 2017: https://efsa.onlinelibrary.wiley.com/doi/epdf/10.2903/j.efsa.2018.5131 Version 4 is associated with the QPS Panel statement EFSA 8: suitability of taxonomic units notified to EFSA until March 2018: https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2018.5315 Versions 5 and 6 were substituted by version 7 – all are associated with the QPS Panel statement EFSA 9: suitability of taxonomic units notified to EFSA until September 2018: https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2019.5555 Version 8 is associated with the QPS Panel statement EFSA 10: suitability of taxonomic units notified to EFSA until March 2019: https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2019.5753 Version 9 is associated with the QPS Panel statement EFSA 11: suitability of taxonomic units notified to EFSA until September 2019: https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2020.5965 and with the Scientific Opinion on the update of the list of QPS-recommended biological agents intentionally added to food or feed as notified to EFSA (2017-2019): https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2020.5966 Version 10: updates version 9 following the update of the qualification of Bacillus velezensis as: ‘absence of toxigenic potential and absence of aminoglycoside production ability’ - applied in the QPS Statement part 11 (ON-5965) and in the 2019 Scientific Opinion (ON-5966). Version 11: updates version 10 following the addition of the Bacillus circulans ‘for production purposes only’ - applied in the QPS Statement part 13 (ON-6377) and in the 2019 Scientific Opinion (ON-5966). Version 12 updates version 11 following the addition of the Bacillus paralicheniformis with the qualifications 'absence of toxigenic activity’ and ‘absence of genetic information to synthesize bacitracin'; and adding Schizochytrium limacinum, which is a synomym for Aurantiochytrium limacinum, - applied in the QPS Statement part 14 (ON-6689) and in the 2019 Scientific Opinion (ON-5966). Version 13 updates version 12 following the addition of Haematococcus lacustris synonym Haematococcus pluvialis, recommended for QPS status with the qualification ‘for production purposes only’. Some other changes related to taxonomy and qualifications are described in the QPS Statement part 15 (ON-7045). Version 14, update of version 13, is related to QPS Statement part 16 (ON-7408). Note: As of January 2022 the updated list is provided only as excel file format. The “list of microorganisms with QPS status” first established in 2007, has been revised and updated annually until 2014 via QPS Opinions; since 2014 the updates are carried out and published every 3 years. If new information is retrieved from extended literature searches (ELS) that would change the QPS status of a TU or its qualifications, this is also published in the Panel Statement covering the previous 6-months period. The ELS protocol can be found at https://doi.org/10.5281/zenodo.3607190 and the Search strategies are available at: https://doi.org/10.5281/zenodo.3607193. The QPS Panel Statement also includes the evaluation of microbiological agents notified to EFSA within the 6-month period for an assessment for feed additives, food enzymes, food additives and flavourings, and novel foods or plant protection products for a possible QPS status. The new QPS status recommendations are incorporated into the 2019 updated “list of microorganisms with QPS status” is available in this upload. The list of “Microbiological agents as notified to EFSA” from 2007, in the context of technical dossiers to EFSA Units, for intentional use in feed and/or food or as sources of food and feed additives, enzymes and plant protection products (PPPs) for safety assessment can be found at https://doi.org/10.5281/zenodo.3607184. Peer reviewed

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    ZENODO
    Dataset . 2022
    License: CC BY
    Data sources: ZENODO
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      ZENODO
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    Authors: Panel, EFSA BIOHAZ; Koutsoumanis, Kostas; Allende, Ana; Alvarez-Ordonez, Avelino; +25 Authors

    This is the list of “Microbiological agents as notified to EFSA” from 2007, in the context of technical dossiers to EFSA Units, for intentional use in feed and/or food or as sources of food and feed additives, enzymes and plant protection products (PPPs) for safety assessment. This is supplementing the QPS statements part 11, part 12, part 13, part 14, part 15, part 16 and the 2019 Scientific Opinion of the BIOHAZ Panel of EFSA - see related identifiers. EFSA topic on QPS: https://www.efsa.europa.eu/en/topics/topic/qualified-presumption-safety-qps Microbial species as notified to EFSA_March2022.xlsx Peer reviewed

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    ZENODO
    Dataset . 2022
    License: CC BY
    Data sources: ZENODO
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      ZENODO
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    Authors: Sinisterra Solis, Nelson Kevin; Sanjuán Pellicer, María Nieves; Ribal Sanchis, Francisco Javier; Estruch Guitart, Arturo Vicente; +1 Authors

    The collated data correspond to the parameters to estimate the resources consumption and the emissions to the environment from the main farming activities (resources consumption and emissions from infrastructure building and management, fertiliser and pesticide production, on-field fertiliser and pesticide emissions, fuel consumption from machinery use, and irrigation), together with the environmental impacts of the unit processes (e.g. electricity mix, production of agricultural inputs) required to assess the environmental impacts from a panel of reference holdings at the main NUTS 2 in Spain. The authors gratefully acknowledge both the Universitat Politècnica de València for providing the funds for N.K. Sinisterra-Solís’s research contract through Subprogram 1 (PAID-01-18).

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    RiuNet
    Dataset . 2022
    Data sources: RiuNet
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      RiuNet
      Dataset . 2022
      Data sources: RiuNet
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    Authors: Maria Raja; Antoni Rosell Melé;

    Unidad de excelencia María de Maeztu CEX2019-000940-M This dataset contains supporting information for "Quantitative link between sedimentary chlorin and sea-surface chlorophyll-a". The dataset consists of global oceanic biogeochemical data from sea-surface, water column and surface sediments. The dataset includes sedimentary chlorin and sea-surface chlorophyll concentration, total organic carbon content, oxygen concentration and mass accumulation rate, among other biogeochemical parameters.

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    Authors: Roos, Deon; Caminero Saldaña, Constantino; Elston, David A.; Mougeot, François; +5 Authors

    Centroid data used for the analysis in Roos et al. Eco Lett. Transects, up to 99 m in length (dependent on the field's length), were surveyed in linear stable landscape features (field, track or ditch margins) to estimate vole abundance from November 2011 until September 2017. Each transect was divided into 3 m sections (33 in total) and the presence or absence of one or more signs of vole activity (i.e., latrines by burrows, fresh vegetation clippings, and recent burrow excavations) in each section was noted. The proportion of sections with signs of vole presence per transect was then used as the abundance index. The number of surveys carried out at any time varied adaptively with the perceived risk of an outbreak (according to changes in estimated abundance in previous monitoring surveys). The response variable typically used in all models is proportional growth rate (r_{t,i}, where is the abundance index for site at time (Royama 1992; Berryman 2002). A benefit of using r_{t,i}, rather than ln(N_{t,i}), is that any multiplicative effects of site quality are cancelled out, provided they are constant over time. To calculate r_{t,i}, vole abundance indices are required at the same location in successive time periods (i.e., N_{t,i} and N_{t+1,i}). Given that exact transect locations were rarely reused in successive months, and all transect measurements took place throughout the year rather than discrete seasons, the data had to be aggregated to consistent locations and times to allow growth rate to be calculated. As such, transects were temporally aggregated into a respective yearly quarter (e.g., January to March 2014). Transects were spatially aggregated by sequentially selecting an unassigned transect as a reference point for the ith centroid and assigning all unassigned transects within a 5 km radius to the ith centroid, and repeating until all transects had been allocated (see Figure 2 for a summary of the number of transects assigned to each centroid, centroid locations, and time series of growth rate of each centroid). Once complete, the mean Julian day, X and Y UTM (Universal Transverse Mercator) and the mean index was calculated for all transects assigned to each centroid for each time period. Where a centroid had successive values of N_{t,i} and N_{t+1,i} available, the corresponding proportional growth rate was calculated. A constant of 3.03 was added to N_{t,i} to avoid zero entries (3.03 was the lowest non-zero value of N observed). The final dataset consisted of 3,751 observations. See README for details of data formatting.

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    ZENODO
    Dataset . 2022
    License: CC BY
    Data sources: ZENODO
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    ZENODO
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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      ZENODO
      Dataset . 2022
      License: CC BY
      Data sources: ZENODO
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      ZENODO
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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    Authors: Gómez Calero, José Alfonso; Alarcón Cabañero, Juan José; Intrigliolo, Diego S.; Dostál, Tomáš; +4 Authors

    Welcome and general introduction by Project Coordinator Jose Alfonso Gomez Calero, IAS-CSIC: -Actual potential of tree deficit irrigation, sensorization and differentiated spatial management for optimizing water use under droughts. Speaker: Juan Jose Alarcón. CEBAS-CSIC -Actual potential of conservation agriculture and green cover crops in the rotation for optimizing soil water retention in annual crops. Speaker: Tomas Dostal. CVTU -Cost Benefit Analysis and carbon/water footprint for specific agricultural systems across countries and farm typologies. Speaker: Gianni Quaranta. UNIBAS, MEDES. -Regional crop modelling for evaluating water use in agriculture. Speaker: Gabrielle de Lannoy. KU Leuven -Training and cooperation in large EU China projects, lessons learned. Speaker: Ian Dodd. ULANC -Key policy recommendations from SHui. Speaker: Rossana Salvia. UNIBAS, MEDES Round Table: Future of optimization of water use in agriculture. Drivers and identification of gaps in knowledge and implementation. Moderator: Jose Alfonso Gomez Calero. IAS-CSIC Participants: Miguel Barnuevo. Union de Pequeños Agricultores; Tim Hess. Cranfield University; Dirk Raes. KU Leuven and Mª Ferrer. FENACORE. SHui (Soil Hydrology research platform underpinning innovation) ran from September 2018 to August 2022 to address best use of soil and water in European and Chinese cropping systems via transdisciplinary research from plot to regional scales. Combining long-term experiments and modelling analysis at different scales evaluated the impact of Best Management Practices (BMPs) on water-limited crop productivity and soil retention, including socio-economic issues. The project also developed tools to facilitate implementation of soil and water saving technologies in specific farming situations. The objective of this in-person meeting in Brussels is to present the main project findings to stakeholders and policy makers, as well as to discuss in a round table the issues related to use of scarce water resources in agriculture. This project is co-funded by the European Commission within H2020 Framework Programme (Project: 773903). This project is co-funded by the Chinese Ministry of Science & Technology under CFM (China-EU Co-Funding Mechanism) Peer reviewed

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    Authors: del Rio, Miren; Ruiz‐Peinado, Ricardo; Holm, Stig‐Olof; Jansons, Aris; +45 Authors

    The increasing disturbances in monocultures around the world are testimony to their instability under global change. Many studies have claimed that temporal stability of productivity increase with species richness, although the ecological fundaments have mainly been investigated through diversity experiments. To adequately manage forest ecosystems, it is necessary to have a comprehensive understanding of the effect of mixing species on the temporal stability of productivity and the way in which this it is influenced by climate conditions across large geographical areas. Here, we used a unique dataset of 261 stands combining pure and two-species mixtures of four relevant tree species over a wide range of climate conditions in Europe to examine the effect of species mixing on the level and temporal stability of productivity. Structural equation modelling was employed to further explore the direct and indirect influence of climate, overyielding, species asynchrony and additive effect (i.e. temporal stability expected from the species growth in monospecific stands) on temporal stability in mixed forests. We showed that by adding only one tree species to monocultures, the level (overyielding: +6%) and stability (temporal stability: +12%) of stand growth increased significantly. We identified the key effect of temperature on destabilizing stand growth, which may be mitigated by mixing species. We further confirmed asynchrony as the main driver of temporal stability in mixed stands, through both the additive effect and species interactions, which modify between-species asynchrony in mixtures in comparison to monocultures. Synthesis and applications. This study highlights the emergent properties associated with mixing two-species, which result in resource efficient and temporally stable production systems. We reveal the negative impact of mean temperature on temporal stability of forest productivity and how the stabilizing effect of mixing two species can counterbalance this impact. The overyielding and temporal stability of growth addressed in this paper are essential for ecosystem services closely linked with the level and rhythm of forest growth. Our results underline that mixing two species can be a realistic and effective nature-based climate solution, which could contribute towards meeting EU climate target policies. [Methods] The research unit is the forest stand. We used data from a total of 261 forest stands belonging to three triplet-transects across Europe. Each triplet consists of a plot established in a two species mixed stands, and two plots on the respective monospecific stands; the three stands are located close to each other under similar environmental conditions. The species composition of the mixtures changes in the three triplet-transects. The first transect covers monospecific and mixed stands of Fagus sylvatica and Pinus sylvestris (32 sites, 96 stands), the second of Quercus petraea and Pinus sylvestris (35 sites, 105 stands), and the third of Picea abies and Pinus sylvestris (20 sites, 60 stands). Plot sizes varies from 0-02 to 0.15 ha depending on stand density a local site characteristics. In each plot the diameter of all trees was measured, and two increment cores per tree were taken at a 1.3 m stem height in a sample of approximately 20 trees per species and plot. Annual ring widths were measured and cross-dated using standardized dendrochronological techniques. The studied period was 2000-2013 for the beech-pine transect and 2004-2017 for the oak-pine and spruce-pine transects (except in five triplets where the period was 2000-2013), the last year corresponding to triplet establishment. Using data from cored trees, tree diameter increment-diameter models were fitted by year, species and plot to estimate diameter increments of noncored trees for the studied period. Dead trees during the last 14 years were estimated using stumps, standing and lying dead trees, and their decomposition status. Based on measured tree diameters and annual diameter increments we estimated species and stand annual basal area (BA) and basal area growth (BAI), which conforms the dataset. Annual climate data were obtained from meteorological weather stations located in the proximity of each triplet (50 triplets). When local station data were not available, national digital climatic atlas data (24 triplets) or more general gridded data (13 triplets) were used (mostly CRU gridded database). For each triplet mean and standard deviation of annual precipitation (P) and mean annual temperature (T) for the studied period were calculated. [Usage Notes] The are presented in an excel-table which can be open freely in different ways (open office, google docs, etc.). Ministerio de Ciencia, Innovación y Universidades. Peer reviewed

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    Borealis
    Dataset . 2022
    Data sources: Datacite
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      Borealis
      Dataset . 2022
      Data sources: Datacite
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    Authors: Biblioteca Tomás Navarro Tomás (CCHS-CSIC);

    [ES] Dataset procedente del catálogo de la Red de Bibliotecas y Archivos del CSIC que recoge los documentos digitalizados del fondo “Manuscritos” conservados en el Archivo de la biblioteca Tomás Navarro Tomás del Centro de Ciencias Humanas y Sociales (CCHS) del CSIC. Se trata de una colección de documentos misceláneos reunidos durante la etapa del Centro de Estudios Históricos (CEH). La colección al completo está formada por 195 documentos agrupados en legajos y códices encuadernados procedentes de archivos privados. Predomina la documentación de carácter notarial, testamentos y títulos de propiedad, de administración y gestión de propiedades, los libros de cuentas pero también hay obras de carácter histórico y literario. Este dataset contiene los 135 documentos digitalizados hasta el momento. [EN] Dataset obtained from the CSIC's Library & Archive Network, which includes the digitalized documents from the collection “Manuscritos” (“Manuscripts”) preserved at the Tomás Navarro Tomás library belonging to the Centro de Ciencias Humanas y Sociales (CCHS) of the CSIC. The now disappeared Centro de Estudios Históricos (CEH) compiled a collection of miscellaneous documents. The complete collection contains 195 documents from private archives that were bound and gathered in codices and dossiers. It comprises mainly notary documents, testaments, property titles, papers related to administration and property management and accounting books, but it also includes work of a historical and literary character. This V1 of the dataset contains the 135 documents that have been digitalized to date. Este conjunto de datos está sujeto a una licencia CC BY-SA 4.0 No

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    DIGITAL.CSIC
    Dataset . 2023
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      DIGITAL.CSIC
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    Authors: Tarifa, Rubén; Calvo, Gemma; González Robles, A.; Pérez, Antonio J.; +2 Authors

    [Methodology] We selected 40 paired olive groves from 20 localities, covering a cultivated area circa 35 km2 and encompassing a distance of 310 km between the most distant ones, hence widely distributed across the Guadalquivir Valley (Andalucía, Spain). Localities were selected to cover a wide gradient in landscape complexity, from landscapes dominated by olive groves to landscapes including a large fraction of natural (forests, scrublands, streams and pastures with native plants) or semi-natural habitats (gullies, vegetated edges and field margins) or other woody and annual crops. At each locality, the pair of olive groves differed in the herb cover management (20 low-intensity and 20 intensive groves) in 2016 while some of them changed their management in 2019, while sharing the same landscape context. Farm size and climatic and edaphic condition varied between localities but were relatively similar between the pair of farms within locality. Low-intensity management involved the maintenance of the ground herb cover most of the year through agroecological practices, such as grazing (mainly with sheep), mowing or stand maintaining between olive trees. Some of these low-intensity managed olive farms where also organic when, in addition, there was no use of pesticides nor synthesis fertilizers. In contrast, intensive management persistently reduced herb cover by herbicides and/or recurrent tillage. The landscape of each locality was classified in simple (characterized by vast extensions of olive groves with very few natural habitat patches), intermediate (olive groves are intermingled with annual crops and with greater extension of natural habitats) or complex (olive groves are scarcer and the area covered by forests, shrublands, streams and grasslands with native plants is larger). The community of herb species was monthly sampled in each olive groves from April to June in 2016 and 2019, using 1-m2 quadrats. We surveyed 4-6 herbs quadrats per grove (in olive field habitats), depending on the orchard size (4 sampling points in small groves [10 ha]) and 2-4 herbs quadrats per olive grove in semi-natural habitats adjacent to olive field. Substantial work was done in the lab for the classification of the many species that we were not able to determine at species level in the field. BBDD_Herbs_sps_habitat_farm.csv ' This data set was compilated with funds by MICINN through European Regional Development Fund [SUMHAL, LIFEWATCH-2019-09-CSIC-4, POPE 2014-2020] [Work Package 9. Task 9.3.2. Model impact of land use change]. Data comes mainly from LIFE project OLIVARES VIVOS (LIFE14 NAT/ ES/1001094) of the European Commission and complemented partially with additional surveys under LIFEWATCH SUMHAL. CSIC is acknowledged for supporting Open Access publication. Our aim was to characterize the species composition of ground herb covers present in the olive groves and their semi-natural adjacent habitats of the southern Iberian Peninsula (Andalucia, Spain), according to herb cover management and landscape complexity of each grove. We selected 40 paired olive farms from 20 localities across Andalucía. [Files] BBDD_Farm_info.csv [shows the location and characteristics of sampled olive farms].-- BBDD_Herbs_sps_habitat_farm.csv [shows herb community detected per habitat within Olive_farm].-- Metada.csv [records information about the meaning of columns in ' Farm_info.csv, 'Plant_database_Habitats_ziziphus.csv', ' Please, see Metadata.csv file. Peer reviewed

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    DIGITAL.CSIC
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      DIGITAL.CSIC
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    Authors: Almagro, María; Díaz-Pereira, Elvira; Martínez-Mena García, M. Dolores; Boix-Fayos, Carolina;

    European Commission: Diverfarming - Crop diversification and low-input farming across Europe: from practitioners engagement and ecosystems services to increased revenues and chain organisation (728003) Database on main crop and secondary crop yields of the CS1 Study case for the period 2019-2021 Peer reviewed

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    ZENODO
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    ZENODO
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      ZENODO
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      ZENODO
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    Authors: EFSA BIOHAZ Panel; Koutsoumanis, Konstantinos; Allende, Ana; Álvarez-Ordóñez, Avelino; +25 Authors

    The European Food Safety Authority (EFSA) asked the Panel on Biological Hazards (BIOHAZ) to deliver a scientific Opinion on the maintenance of the list of qualified presumption of safety (QPS) biological agents. The QPS approach was developed by the EFSA Scientific Committee to provide a harmonised generic pre-evaluation to support safety risk assessments of biological agents intentionally introduced into the food and feed chain, in support of the concerned scientific Panels and Units in the frame of market authorisations. The taxonomic identity, body of knowledge, the safety concerns in relation to pathogenicity and virulence, and the safety for the environment of those microbiological agents are assessed. Safety concerns identified for a respective taxonomic unit (TU) are, where possible and reasonable in number, reflected as ‘qualifications’ that are assessed at the strain level by the EFSA’s scientific Panels. Useful links on EFSA QPS EFSA topic on QPS: https://www.efsa.europa.eu/en/topics/topic/qualified-presumption-safety-qps Link to the virtual issue on QPS on Wiley Online Library: https://efsa.onlinelibrary.wiley.com/doi/toc/10.1002/(ISSN)1831-4732.QPS Versions history: Versions 1 and 2 were substituted by version 3 – all are associated with the QPS Panel statement EFSA 7: suitability of taxonomic units notified to EFSA until September 2017: https://efsa.onlinelibrary.wiley.com/doi/epdf/10.2903/j.efsa.2018.5131 Version 4 is associated with the QPS Panel statement EFSA 8: suitability of taxonomic units notified to EFSA until March 2018: https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2018.5315 Versions 5 and 6 were substituted by version 7 – all are associated with the QPS Panel statement EFSA 9: suitability of taxonomic units notified to EFSA until September 2018: https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2019.5555 Version 8 is associated with the QPS Panel statement EFSA 10: suitability of taxonomic units notified to EFSA until March 2019: https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2019.5753 Version 9 is associated with the QPS Panel statement EFSA 11: suitability of taxonomic units notified to EFSA until September 2019: https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2020.5965 and with the Scientific Opinion on the update of the list of QPS-recommended biological agents intentionally added to food or feed as notified to EFSA (2017-2019): https://efsa.onlinelibrary.wiley.com/doi/10.2903/j.efsa.2020.5966 Version 10: updates version 9 following the update of the qualification of Bacillus velezensis as: ‘absence of toxigenic potential and absence of aminoglycoside production ability’ - applied in the QPS Statement part 11 (ON-5965) and in the 2019 Scientific Opinion (ON-5966). Version 11: updates version 10 following the addition of the Bacillus circulans ‘for production purposes only’ - applied in the QPS Statement part 13 (ON-6377) and in the 2019 Scientific Opinion (ON-5966). Version 12 updates version 11 following the addition of the Bacillus paralicheniformis with the qualifications 'absence of toxigenic activity’ and ‘absence of genetic information to synthesize bacitracin'; and adding Schizochytrium limacinum, which is a synomym for Aurantiochytrium limacinum, - applied in the QPS Statement part 14 (ON-6689) and in the 2019 Scientific Opinion (ON-5966). Version 13 updates version 12 following the addition of Haematococcus lacustris synonym Haematococcus pluvialis, recommended for QPS status with the qualification ‘for production purposes only’. Some other changes related to taxonomy and qualifications are described in the QPS Statement part 15 (ON-7045). Version 14, update of version 13, is related to QPS Statement part 16 (ON-7408). Note: As of January 2022 the updated list is provided only as excel file format. The “list of microorganisms with QPS status” first established in 2007, has been revised and updated annually until 2014 via QPS Opinions; since 2014 the updates are carried out and published every 3 years. If new information is retrieved from extended literature searches (ELS) that would change the QPS status of a TU or its qualifications, this is also published in the Panel Statement covering the previous 6-months period. The ELS protocol can be found at https://doi.org/10.5281/zenodo.3607190 and the Search strategies are available at: https://doi.org/10.5281/zenodo.3607193. The QPS Panel Statement also includes the evaluation of microbiological agents notified to EFSA within the 6-month period for an assessment for feed additives, food enzymes, food additives and flavourings, and novel foods or plant protection products for a possible QPS status. The new QPS status recommendations are incorporated into the 2019 updated “list of microorganisms with QPS status” is available in this upload. The list of “Microbiological agents as notified to EFSA” from 2007, in the context of technical dossiers to EFSA Units, for intentional use in feed and/or food or as sources of food and feed additives, enzymes and plant protection products (PPPs) for safety assessment can be found at https://doi.org/10.5281/zenodo.3607184. Peer reviewed

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    ZENODO
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      ZENODO
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    Authors: Panel, EFSA BIOHAZ; Koutsoumanis, Kostas; Allende, Ana; Alvarez-Ordonez, Avelino; +25 Authors

    This is the list of “Microbiological agents as notified to EFSA” from 2007, in the context of technical dossiers to EFSA Units, for intentional use in feed and/or food or as sources of food and feed additives, enzymes and plant protection products (PPPs) for safety assessment. This is supplementing the QPS statements part 11, part 12, part 13, part 14, part 15, part 16 and the 2019 Scientific Opinion of the BIOHAZ Panel of EFSA - see related identifiers. EFSA topic on QPS: https://www.efsa.europa.eu/en/topics/topic/qualified-presumption-safety-qps Microbial species as notified to EFSA_March2022.xlsx Peer reviewed

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    ZENODO
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      ZENODO
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    Authors: Sinisterra Solis, Nelson Kevin; Sanjuán Pellicer, María Nieves; Ribal Sanchis, Francisco Javier; Estruch Guitart, Arturo Vicente; +1 Authors

    The collated data correspond to the parameters to estimate the resources consumption and the emissions to the environment from the main farming activities (resources consumption and emissions from infrastructure building and management, fertiliser and pesticide production, on-field fertiliser and pesticide emissions, fuel consumption from machinery use, and irrigation), together with the environmental impacts of the unit processes (e.g. electricity mix, production of agricultural inputs) required to assess the environmental impacts from a panel of reference holdings at the main NUTS 2 in Spain. The authors gratefully acknowledge both the Universitat Politècnica de València for providing the funds for N.K. Sinisterra-Solís’s research contract through Subprogram 1 (PAID-01-18).

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    RiuNet
    Dataset . 2022
    Data sources: RiuNet
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      RiuNet
      Dataset . 2022
      Data sources: RiuNet
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    Authors: Maria Raja; Antoni Rosell Melé;

    Unidad de excelencia María de Maeztu CEX2019-000940-M This dataset contains supporting information for "Quantitative link between sedimentary chlorin and sea-surface chlorophyll-a". The dataset consists of global oceanic biogeochemical data from sea-surface, water column and surface sediments. The dataset includes sedimentary chlorin and sea-surface chlorophyll concentration, total organic carbon content, oxygen concentration and mass accumulation rate, among other biogeochemical parameters.

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    Authors: Roos, Deon; Caminero Saldaña, Constantino; Elston, David A.; Mougeot, François; +5 Authors

    Centroid data used for the analysis in Roos et al. Eco Lett. Transects, up to 99 m in length (dependent on the field's length), were surveyed in linear stable landscape features (field, track or ditch margins) to estimate vole abundance from November 2011 until September 2017. Each transect was divided into 3 m sections (33 in total) and the presence or absence of one or more signs of vole activity (i.e., latrines by burrows, fresh vegetation clippings, and recent burrow excavations) in each section was noted. The proportion of sections with signs of vole presence per transect was then used as the abundance index. The number of surveys carried out at any time varied adaptively with the perceived risk of an outbreak (according to changes in estimated abundance in previous monitoring surveys). The response variable typically used in all models is proportional growth rate (r_{t,i}, where is the abundance index for site at time (Royama 1992; Berryman 2002). A benefit of using r_{t,i}, rather than ln(N_{t,i}), is that any multiplicative effects of site quality are cancelled out, provided they are constant over time. To calculate r_{t,i}, vole abundance indices are required at the same location in successive time periods (i.e., N_{t,i} and N_{t+1,i}). Given that exact transect locations were rarely reused in successive months, and all transect measurements took place throughout the year rather than discrete seasons, the data had to be aggregated to consistent locations and times to allow growth rate to be calculated. As such, transects were temporally aggregated into a respective yearly quarter (e.g., January to March 2014). Transects were spatially aggregated by sequentially selecting an unassigned transect as a reference point for the ith centroid and assigning all unassigned transects within a 5 km radius to the ith centroid, and repeating until all transects had been allocated (see Figure 2 for a summary of the number of transects assigned to each centroid, centroid locations, and time series of growth rate of each centroid). Once complete, the mean Julian day, X and Y UTM (Universal Transverse Mercator) and the mean index was calculated for all transects assigned to each centroid for each time period. Where a centroid had successive values of N_{t,i} and N_{t+1,i} available, the corresponding proportional growth rate was calculated. A constant of 3.03 was added to N_{t,i} to avoid zero entries (3.03 was the lowest non-zero value of N observed). The final dataset consisted of 3,751 observations. See README for details of data formatting.

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    ZENODO
    Dataset . 2022
    License: CC BY
    Data sources: ZENODO
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    ZENODO
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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      ZENODO
      Dataset . 2022
      License: CC BY
      Data sources: ZENODO
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      ZENODO
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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    Authors: Gómez Calero, José Alfonso; Alarcón Cabañero, Juan José; Intrigliolo, Diego S.; Dostál, Tomáš; +4 Authors

    Welcome and general introduction by Project Coordinator Jose Alfonso Gomez Calero, IAS-CSIC: -Actual potential of tree deficit irrigation, sensorization and differentiated spatial management for optimizing water use under droughts. Speaker: Juan Jose Alarcón. CEBAS-CSIC -Actual potential of conservation agriculture and green cover crops in the rotation for optimizing soil water retention in annual crops. Speaker: Tomas Dostal. CVTU -Cost Benefit Analysis and carbon/water footprint for specific agricultural systems across countries and farm typologies. Speaker: Gianni Quaranta. UNIBAS, MEDES. -Regional crop modelling for evaluating water use in agriculture. Speaker: Gabrielle de Lannoy. KU Leuven -Training and cooperation in large EU China projects, lessons learned. Speaker: Ian Dodd. ULANC -Key policy recommendations from SHui. Speaker: Rossana Salvia. UNIBAS, MEDES Round Table: Future of optimization of water use in agriculture. Drivers and identification of gaps in knowledge and implementation. Moderator: Jose Alfonso Gomez Calero. IAS-CSIC Participants: Miguel Barnuevo. Union de Pequeños Agricultores; Tim Hess. Cranfield University; Dirk Raes. KU Leuven and Mª Ferrer. FENACORE. SHui (Soil Hydrology research platform underpinning innovation) ran from September 2018 to August 2022 to address best use of soil and water in European and Chinese cropping systems via transdisciplinary research from plot to regional scales. Combining long-term experiments and modelling analysis at different scales evaluated the impact of Best Management Practices (BMPs) on water-limited crop productivity and soil retention, including socio-economic issues. The project also developed tools to facilitate implementation of soil and water saving technologies in specific farming situations. The objective of this in-person meeting in Brussels is to present the main project findings to stakeholders and policy makers, as well as to discuss in a round table the issues related to use of scarce water resources in agriculture. This project is co-funded by the European Commission within H2020 Framework Programme (Project: 773903). This project is co-funded by the Chinese Ministry of Science & Technology under CFM (China-EU Co-Funding Mechanism) Peer reviewed

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    Authors: del Rio, Miren; Ruiz‐Peinado, Ricardo; Holm, Stig‐Olof; Jansons, Aris; +45 Authors

    The increasing disturbances in monocultures around the world are testimony to their instability under global change. Many studies have claimed that temporal stability of productivity increase with species richness, although the ecological fundaments have mainly been investigated through diversity experiments. To adequately manage forest ecosystems, it is necessary to have a comprehensive understanding of the effect of mixing species on the temporal stability of productivity and the way in which this it is influenced by climate conditions across large geographical areas. Here, we used a unique dataset of 261 stands combining pure and two-species mixtures of four relevant tree species over a wide range of climate conditions in Europe to examine the effect of species mixing on the level and temporal stability of productivity. Structural equation modelling was employed to further explore the direct and indirect influence of climate, overyielding, species asynchrony and additive effect (i.e. temporal stability expected from the species growth in monospecific stands) on temporal stability in mixed forests. We showed that by adding only one tree species to monocultures, the level (overyielding: +6%) and stability (temporal stability: +12%) of stand growth increased significantly. We identified the key effect of temperature on destabilizing stand growth, which may be mitigated by mixing species. We further confirmed asynchrony as the main driver of temporal stability in mixed stands, through both the additive effect and species interactions, which modify between-species asynchrony in mixtures in comparison to monocultures. Synthesis and applications. This study highlights the emergent properties associated with mixing two-species, which result in resource efficient and temporally stable production systems. We reveal the negative impact of mean temperature on temporal stability of forest productivity and how the stabilizing effect of mixing two species can counterbalance this impact. The overyielding and temporal stability of growth addressed in this paper are essential for ecosystem services closely linked with the level and rhythm of forest growth. Our results underline that mixing two species can be a realistic and effective nature-based climate solution, which could contribute towards meeting EU climate target policies. [Methods] The research unit is the forest stand. We used data from a total of 261 forest stands belonging to three triplet-transects across Europe. Each triplet consists of a plot established in a two species mixed stands, and two plots on the respective monospecific stands; the three stands are located close to each other under similar environmental conditions. The species composition of the mixtures changes in the three triplet-transects. The first transect covers monospecific and mixed stands of Fagus sylvatica and Pinus sylvestris (32 sites, 96 stands), the second of Quercus petraea and Pinus sylvestris (35 sites, 105 stands), and the third of Picea abies and Pinus sylvestris (20 sites, 60 stands). Plot sizes varies from 0-02 to 0.15 ha depending on stand density a local site characteristics. In each plot the diameter of all trees was measured, and two increment cores per tree were taken at a 1.3 m stem height in a sample of approximately 20 trees per species and plot. Annual ring widths were measured and cross-dated using standardized dendrochronological techniques. The studied period was 2000-2013 for the beech-pine transect and 2004-2017 for the oak-pine and spruce-pine transects (except in five triplets where the period was 2000-2013), the last year corresponding to triplet establishment. Using data from cored trees, tree diameter increment-diameter models were fitted by year, species and plot to estimate diameter increments of noncored trees for the studied period. Dead trees during the last 14 years were estimated using stumps, standing and lying dead trees, and their decomposition status. Based on measured tree diameters and annual diameter increments we estimated species and stand annual basal area (BA) and basal area growth (BAI), which conforms the dataset. Annual climate data were obtained from meteorological weather stations located in the proximity of each triplet (50 triplets). When local station data were not available, national digital climatic atlas data (24 triplets) or more general gridded data (13 triplets) were used (mostly CRU gridded database). For each triplet mean and standard deviation of annual precipitation (P) and mean annual temperature (T) for the studied period were calculated. [Usage Notes] The are presented in an excel-table which can be open freely in different ways (open office, google docs, etc.). Ministerio de Ciencia, Innovación y Universidades. Peer reviewed

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    Borealis
    Dataset . 2022
    Data sources: Datacite
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      Borealis
      Dataset . 2022
      Data sources: Datacite
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